Can anyone please help me with handling Genbank .gbf files? Recently I've generated Sequin (.sqn) files and Genbank (.gbf) files which I don't know what to do with them to obtain the accession IDs of the translated nucleotide sequences such that I know the names of the proteins identified. the .gbf files look something like this when I open with Notepad:
LOCUS Scaffold1 1325603 bp DNA linear 14-FEB-2013 DEFINITION No definition line found. ACCESSION VERSION KEYWORDS . SOURCE Unknown. ORGANISM Unknown. Unclassified. FEATURES Location/Qualifiers source 1..1325603 /organism="unknown" /mol_type="genomic DNA" gene complement(<1..555) /locus_tag="asmbl_1" CDS complement(<1..555) /locus_tag="asmbl_1" /codon_start=1 /transl_table=11 /product="tat (twin-arginine translocation) pathway signal sequence domain protein" /translation="MKEFHSTLSRRDFMKSLGVVGAGLGTMSAAAPVFHDLDEVTSST LGINKNPWWVKERDFKNPTVPIDWSKVTRQPGVFQGLPRPTVADFTKAGVVGGTSTDL ETPEMALTLYDAMAKEFPGWTPGYAGMGDTRTTALCNASKFMMFGAWPGNMEMGGKRV NVIGAIMAAGGSPTFTPWLGPQLDT" ... ...
Does anyone here know of a software tool which I can use to make sense out of these and generate accession IDs for them?
Thank you in advance!