I am trying to install Somatic Sniper on Mac. In the ReadMe file I am not clear with this particular build instruction? Could anyone please clarify what exactly I should be doing here?
h3. Compile SomaticSniper * SomaticSniper does not support in source builds. Create a new build directory, enter it, and run:
bc.. cmake /path/to/somatic-sniper/repo make
Also, when I ran the command line below,
h2. Clone the SomaticSniper repository * Recursively clone the git repository
git clone --recursive git://github.com/genome/somatic-sniper.git
I am getting the following error msg: any suggestions on how I can fix this?
user MacBook Pro:somatic-sniper-master User$ git clone --recursive http://github.com/genome/somatic-sniper.git
Cloning into 'somatic-sniper'... remote: Counting objects: 897, done. remote: Compressing objects: 100% (413/413), done. remote: Total 897 (delta 453), reused 857 (delta 413) Receiving objects: 100% (897/897), 1.43 MiB | 692 KiB/s, done. Resolving deltas: 100% (453/453), done. Submodule 'build-common' (git://github.com/genome/build-common.git) registered for path 'build-common' Cloning into 'build-common'... fatal: unable to connect to github.com: github.com[0: 188.8.131.52]: errno=Operation timed out
I would really appreciate any help in regards to installing this program.