Off topic:How To Parse The Xml From Entrez Db=Protein Using Biopython
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11.1 years ago
heath ▴ 20

I want to obtain a proteins gi no# along with its cd root no# and taxid from a proteins NP_xxx. 1 (id#) when I use the Biopython's entrez as following

 handle= Entrez.efetch(db='protein', id='NP_000368.1', retmode='xml')
 record= Entrez.read(handle)

the record is a list-elements object.and looks very complicated and I somehow can not really locate the "Tag" or "Key"??.How i parse the output to obtain the information I interested in?

BTW where I can see the overview for which DTD information has been retrieved from the ncbi?

biopython entrez protein xml • 5.2k views
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