Question: Best Resources For Developmental Biology / Embryology Connected To Bioinformatics
1
gravatar for Samuel Lampa
9.6 years ago by
Samuel Lampa1.2k
Stockholm
Samuel Lampa1.2k wrote:

I have an MSc in Biotechnology with some basics in Bioinformatics and plan to test some ideas for simulating embryologic development processes, hopefully connected to known gene regulatory networks (GRNs) regulating these processes.

For this purpose, I'm looking for good books or online material to gain the knowledge required. I think I firstly need a foundation in developmental biology so tips on good such books are welcome. Additionally any resources for working with developmental biology in a bioinformatics context is welcome too.

gene network simulation • 2.2k views
ADD COMMENTlink modified 9.6 years ago by Mikael Huss4.7k • written 9.6 years ago by Samuel Lampa1.2k
4
gravatar for Mary
9.6 years ago by
Mary11k
Boston MA area
Mary11k wrote:

That's kind of a broad question. But I'll give you my favorite mouse resource: http://www.emouseatlas.org/emap/home.html

ADD COMMENTlink written 9.6 years ago by Mary11k

Thanks! The EMAGE software, used in the "Embryo Space" looks very interesting for my use case (I suppose experimental time/space data is very important for verifying (at least 3D-based) simulations...)

ADD REPLYlink written 9.6 years ago by Samuel Lampa1.2k

I'll give you the accept mark for now ... guess these kind of integrative resources are among the better sources ...

ADD REPLYlink written 9.6 years ago by Samuel Lampa1.2k
1
gravatar for Mikael Huss
9.6 years ago by
Mikael Huss4.7k
Stockholm
Mikael Huss4.7k wrote:

You should definitely check out Eric Davidson's work on GRNs in sea urchin development. See e g http://www.its.caltech.edu/~mirsky/pubs.htm.

ADD COMMENTlink written 9.6 years ago by Mikael Huss4.7k

True. I actually stumbled into his work some time ago and came to read quite some, and I can only agree. Also, AFAIS it's impressive stuff.

ADD REPLYlink written 9.6 years ago by Samuel Lampa1.2k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1745 users visited in the last hour