Question: Comparison Of Gene Expression With Cai Or Nc
gravatar for martin.kavscek
5.8 years ago by
martin.kavscek20 wrote:

I would like to compare homologus genes in different species and I do not want to rely on experimental data for gene expression. I was searching the literature and I found thet computing gCAI (which derives a set S from genome) and the "effective usage of codons - Nc" which does not need any reference set to calculate it. I am wondering if anyone have experiences about which one is better to use if I would like to compare a codon usage between two different species that have different codon usage bias.

Thank you for your answers! Martin

codon comparison • 1.3k views
ADD COMMENTlink modified 5.8 years ago by Malachi Griffith17k • written 5.8 years ago by martin.kavscek20
Please log in to add an answer.


Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1193 users visited in the last hour