Question: Comparison Of Gene Expression With Cai Or Nc
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gravatar for martin.kavscek
6.3 years ago by
martin.kavscek20 wrote:

I would like to compare homologus genes in different species and I do not want to rely on experimental data for gene expression. I was searching the literature and I found thet computing gCAI (which derives a set S from genome) and the "effective usage of codons - Nc" which does not need any reference set to calculate it. I am wondering if anyone have experiences about which one is better to use if I would like to compare a codon usage between two different species that have different codon usage bias.

Thank you for your answers! Martin

codon comparison • 1.4k views
ADD COMMENTlink modified 6.3 years ago by Malachi Griffith17k • written 6.3 years ago by martin.kavscek20
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