Question: Normalize A Single Array To An Already-Normalized Set Of Arrays?
2
gravatar for Ryan Thompson
6.3 years ago by
Ryan Thompson3.4k
TSRI, La Jolla, CA
Ryan Thompson3.4k wrote:

I'm working on a project where I am training a classifier on a training set of microarrays, and then I want to use the classifier to classify individual array samples independenly of each other (essentially simulating a clinical diagnostic setting, where individual samples must be analyzed separately from each other). This means that for each individual sample that I want to classify, I need to somehow normalize that array to the training set, or else the trained classifier will not be applicable. Are there any methods for normalizing a new array to an existing set of already-normalized arrays?

normalization microarray • 1.4k views
ADD COMMENTlink modified 6.3 years ago by Steve Lianoglou5.0k • written 6.3 years ago by Ryan Thompson3.4k
2
gravatar for Steve Lianoglou
6.3 years ago by
Steve Lianoglou5.0k
US
Steve Lianoglou5.0k wrote:

I believe this is what fRMA was built for:

If that's not helpful in itself, I guess the references therein would be a good place to start.

ADD COMMENTlink written 6.3 years ago by Steve Lianoglou5.0k

Thanks, I tried fRMA and it worked great.

ADD REPLYlink written 6.3 years ago by Ryan Thompson3.4k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 638 users visited in the last hour