Hi, I installed SomaticSniper in my CentOS6 following the instruction here. https://github.com/genome/somatic-sniper I have both samtools-0.1.6 and 0.1.8 installed. To get the SomaticSniper compiled, I did "export SAMTOOLS_ROOT=/path/to/samtool-0.1.6" And then it was compiled successfully. However, I got the following error while running it.
"Floating point exception(core dumped) $PATH_SNIPER -f $PATH_REF $T_BAM $N_BAM $OUT_SNIPER "
I read previous post. Some say this error is due to the reference of mapping and SomaticSniper are different. But I checked the reference I used. They are the same human_g1K_v37.
Anyone knows how to fix this error? Thanks in advance!