I was wondering if it would be possible to fetch the list of organism where the domain of interest is present (input will be interpro id). Does any one know how to do this.
You can use the InterPro BioMart to get this information - and because BioMart has built in APIs, you can do it programmatically too.
I made a canned query for IPR000001 (Kringle) here: http://www.ebi.ac.uk/interpro/biomart/martview?VIRTUALSCHEMANAME=default&ATTRIBUTES=protein.default.protein_attributes.entry_ac|protein.default.protein_attributes.taxonomy_scientific_name|protein.default.protein_attributes.protein_tax_id&FILTERS=protein.default.protein_filterpage.entry_ac.'IPR000001'&VISIBLEPANEL=resultspanel
Great. Thanks a lot.
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