We have received .sff files from a GS FLX 454 Titanium run of a single forward sequence amplicon. I have followed the AVA manual to create a reference, sample, amplicon, etc. and have made the necessary associations, and loaded in the SFF file. Blueprints, MIDs, etc. are all shown. The relevant "Active" entry is selected
However, after computing the results, I am always shown "No sample/reference data to align"" and "No variants to load". I have tried with a known variant, and without any variants specified. I have also tried with different blueprints selected.