Entering edit mode
10.0 years ago
anonymous • 0
Hi all, I am new to bioinformatics. I am interested in studying binding sites of proteins at the molecular level. I want to know is there any software by which I can get the molecular insight of the binding sites like what types of bonds are present (e.g. H-bond, pi bond, electrostatic) What atoms are involved? What part of the amino acid is involved: amine (-NH2), carboxylic acid (-COOH) groups or the side chain?
Pymol : http://sourceforge.net/projects/pymol/