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10.8 years ago
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What are some available packages in either Python or R for creating biclustering heatmaps with dendrograms for gene expression value (e.g., from RNASEQ), as in this figure?
http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1002936#pcbi-1002936-g003
the clustering is done across two dimensions (rows and columns), displayed as as a heat map with dendrograms for both axes.