Chains And Nets Alignments?
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8.3 years ago
EvoGen ▴ 10

I did a pairwise alignment for a pair of organisms using the blastzChainNet pipeline from the UCSC.As the output got the chain and net files as the output. However can anybody(who has already worked with these chain/Nets files) help me understand the output. I mean what do the chain score or net score imply??

alignment pairwise ucsc • 2.2k views
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