Tools To Determine Intersections Between Complex Sv In Vcfs?
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10.7 years ago

Are there any available tools to find complex overlaps between SV vcfs?

For example, a tool to compare Breakends in vcf format (SVTYPE=BND) between two vcf files, given a certain window for both coordinates.

The other type of SVs are probably easier than BNDs, but still more complex than just comparing SNVs between different vcf files.

vcf sv • 1.9k views
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