Question: Is There A Database Or Web Service That Describes Drug-Protein Interaction
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gravatar for kewalyataruna
7.2 years ago by
kewalyataruna20 wrote:

Hi I would like to ask you that is there any database which can help me to explore drug-protein interaction. If I have a protein and know that which drug is recommended to it, now I would like to find out the interaction region of that protein with the drug and if possible I want its result in the form of fasta sequence specifying the interaction according to the protein domain. Thanks

protein • 2.4k views
ADD COMMENTlink modified 14 days ago by casey20 • written 7.2 years ago by kewalyataruna20
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gravatar for sarahhunter
7.2 years ago by
sarahhunter600
Cambridge, UK
sarahhunter600 wrote:

Have you tried the ChEMBL database? I'm not sure it will do everything you want, but it might do some of it...

ADD COMMENTlink written 7.2 years ago by sarahhunter600
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gravatar for casey
14 days ago by
casey20
casey20 wrote:

I know it's been a while since this was posted, but just in case this is a helpful tool for a drug-protein binding-affinity prediction that takes in a SMILE sequence and an Amino Acid sequence and returns an integer that represents the binding-affinity. Here is the link to the model overview: https://model.modelforest.ai/binding-model

ADD COMMENTlink written 14 days ago by casey20
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