When I run the bioconductor installer, it tells me my installation is out-of-date and refers me to the bioconductor install page for upgrade instructions.
> source("http://bioconductor.org/biocLite.R") Your Bioconductor is out-of-date, upgrade to version 2.12 by following instructions at http://bioconductor.org/install. Bioconductor version 2.11 (BiocInstaller 1.8.3), ?biocLite for help
I've followed every set of instructions on that page, including recompiling all bioconductor packages from source, and yet when I restart R and load biocLite.R I get the same warning message about bioconductor being out of date. How can I upgrade my bioconductor installation?
If it makes any difference, I'm running R 2.15.3 on Mac OS 10.8.4.