Question: Intersectbed Provides An Empty Output
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joanne.lee • 0 wrote:
Hi,
I've downloaded the recent Cygwin version 1.7.24 and an trying to run bedTools but I get an empty file as my output. When I run the same commandline and files on a colleagues computer also through Cygwin I get a file containing the overlaps I seek. is the new Cygwin not compatable with BedTools? I've put the command line we used below:
./intersectbed -a Gene_body.bed -b EdgeR1.bed -wao > yyy.temp
Any help would be appreciated.
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modified 7.4 years ago
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Istvan Albert ♦♦ 86k
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7.4 years ago by
joanne.lee • 0