Question: How To Find Human Homologs For Proteins From Candida Albicans
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gravatar for nepalis
5.9 years ago by
nepalis10
nepalis10 wrote:

I have a list of proteins from Candida albicans and i need to find humon hololog for ithe protein in the list. Is there a detabase or tool to do this ?

thanks!!

homology protein human • 1.5k views
ADD COMMENTlink modified 6 months ago by Biostar ♦♦ 20 • written 5.9 years ago by nepalis10
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gravatar for fridhackery
5.9 years ago by
fridhackery140
fridhackery140 wrote:

Use blastp and CDD at NCBI

ADD COMMENTlink written 5.9 years ago by fridhackery140
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gravatar for Ashutosh Pandey
5.9 years ago by
Philadelphia
Ashutosh Pandey11k wrote:

Use can also use some resource like Homologene (http://www.ncbi.nlm.nih.gov/homologene) and BioMart (http://useast.ensembl.org/biomart/martview/) to get the list of human orthologs.

ADD COMMENTlink modified 5.9 years ago • written 5.9 years ago by Ashutosh Pandey11k

I just realised that Homologene may not have C. albicans data in it. There is another resource http://www.candidagenome.org/ . It will give you the Saccharomyces cerevisiae ortholog for Candida albicans and you can use the Saccharomyces cerevisiae ortholog to get the human ortholog using one of the above resource or Entrez gene NCBI.

ADD REPLYlink modified 5.9 years ago • written 5.9 years ago by Ashutosh Pandey11k
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