Chromosomal Plots For Mouse Reference
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8.7 years ago

Hi,

I am trying to plot something similar to this http://ars.els-cdn.com/content/image/1-s2.0-S0002929709000159-gr1.jpg with multiple data e.g. snps, indels etc on mouse reference. Is there any R package that can do this?

Thanks

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You could follow something from this documentation http://www.rqtl.org/tutorials/geneticmaps.pdf . Its quite straight forward.

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8.7 years ago
Mary 11k

You could do this quickly with the UCSC Genome Graphs tools: http://genome.ucsc.edu/goldenPath/help/hgGenomeHelp.html

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