Quantifying The Area Under A K-Mer Frequency Distribution Curve To Estimate Heterozygosity
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7.6 years ago
jomaco ▴ 190

Hi,

I have produced a k-mer frequency distribution curve using Jellyfish 1.1.11. It has a clear bi-modal distribution suggesting the sample used to produce it is heterozygous. Is it possible to use this software/graph or any other method to quantify the level of heterozygosity?

Thanks,

Jom.

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