Off topic:Installing Bioconductor On Centos6
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10.6 years ago
syrup16g_TO ▴ 40

I'm new to bioinformatics and R.

I have trouble in installing Bioconductor on CentOS6.4.

R version :

R version 3.0.1 (2013-05-16) -- "Good Sport" Copyright (C) 2013 The R Foundation for Statistical Computing Platform: x86_64-redhat-linux-gnu (64-bit)

Error message :

> source("http://bioconductor.org/biocLite.R")

Installing package into ‘/home/okuno/R/x86_64-redhat-linux-gnu-library/3.0’ (as ‘lib’ is unspecified) Warning: unable to access index for repository http://www.bioconductor.org/packages/2.12/bioc/src/contrib 'biocLite.R' failed to install 'BiocInstaller', use 'install.packages("BiocInstaller", repos="http://www.bioconductor.org/packages/2.12/bioc")' Warning message : package ‘BiocInstaller’ is not available (for R version 3.0.1)

I have another machine with Windows7OS in the same network, and I could install Bioconductor on the Windows machine. However, I can't do that on CensOS6 machine.

What am I doing wrong?

bioconductor • 3.4k views
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