Question: How Can I Fetch Exon-Exon Junction Sequnce For Genes Found Using Galaxy?
2
gravatar for laceym294
6.4 years ago by
laceym29420
laceym29420 wrote:

Hello there,

I'm trying to fetch sequence for Exon-Exon junctions for a specific set of genes found using Galaxy: specifically I'm looking for a way to fetch 30bp of sequence into the exons on each side. The data I have is standard BED format (Chromosome, start and stop positions, strand etc).

I've come rather unstuck and appreciate the help!

galaxy sequence • 1.4k views
ADD COMMENTlink written 6.4 years ago by laceym29420
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