How To Compare Go Term Lists And Create Matching Network?

Question

[biotech]

Hi there,

I would like to compare three lists of GO terms, coming from an enrichment analysis and create a network figure and some tables with shared GO terms. Since a simple Venn diagram will not take into account possible parent absence in some samples, could you please suggest me the appropriate tool or refer me to a post if this has been previously asked? I've looking Tools For Visualizing Overlap Between Go Terms, but I'm very new to this and don't know where to start.

Cytoscape looks promising, specially because its easy to use GUI but I'm also open to new tools. Does this tool meets my needs? enter link description here

Last, I'm working with bacterial data, non-model organism.

Thanks for your help. Best, Bernardo