Question: Rna-Seq Bias: Conditional Quantile Normalization
1
gravatar for Arun
8.1 years ago by
Arun2.3k
Germany
Arun2.3k wrote:

Hi,

I just skimmed through this post a couple of days back. It seems to be a method to correct the bias in the RNA-Seq data without loss using conditional quantile normalization. Has anyone ever tried this? Or have some idea about this? Seems interesting.

data rna • 3.2k views
ADD COMMENTlink written 8.1 years ago by Arun2.3k
1

There's also this: http://genomebiology.com/content/12/3/R22

ADD REPLYlink written 8.1 years ago by Gww2.6k
1

Is it for differential gene expression? If so, there is also this group that is looking at bias due to gene length and sequencing depth : http://bioinfo.cipf.es/aconesa/research3.html Their tool is called NOISeq

ADD REPLYlink written 8.1 years ago by Fred720
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