I would like to know if anyone is aware of an open-source web based data management solution / LIMS that can handle NGS/RNA-Seq data adequately. It should help to organize sequencing data (i.e. raw reads), read mappings and further downstream analyses inside a lab. Maybe there is already something out there that offers proper data models and handy functionalities/visualizations. Otherwise I need to start something from scratch using Django.
Thanks Jeremy. LIMSs were covered in general quite often but as far as I can see there is nothing that supports RNA-Seq besides general data management capabilities. So guess I have to use one of those or write my own application.