Hi Thanks for comments, but the problem has not been solved yet. When I type this command: gds = getGEO('GDS2478'), I get the following error:
Error in download.file(myurl, destfile, mode = mode, quiet = TRUE, method = getOption("download.file.method.GEOquery")) :
cannot open URL 'ftp://ftp.ncbi.nlm.nih.gov/geo/datasets/GDS2nnn/GDS2478/soft/GDS2478.soft.gz'
In addition: Warning message:
In download.file(myurl, destfile, mode = mode, quiet = TRUE, method = getOption("download.file.method.GEOquery")) :
InternetOpenUrl failed: 'The server name or address could not be resolved.
Could it be related to slow internet connection or something similar? Thanks anyway for your response. Nazanin
It would be better to use a comment thread at your original question to resolve these issues. You have now posted a variation of the same question 3 times.
Note: this and related questions are now resolved. Questioner posted the resolution as yet another question...with yet more unhelpful tags...which was deleted.