I have a list of different pathways and I would like to filter this pathways based on the semantic similarity (Resnik distance, e.g) of the GO terms associated to each gene. However, I would like to consider only the GO terms with evidence codes related to experimental support. Could you tell me any approach, mainly in R/Bioconductor. I have tested GOsemsim but I am not able to filter firs the evidence codes.
Thanks a lot