We're planning to do a great deal of Illumina sequencing (several insects) in our lab and I was looking at data management systems that will be able to handle all this data (raw reads, assemblies, annotations, etc). From what I've found so far it looks like the Sequence Retrieval System is doing exactly what I want, but I'm a bit skeptical since EBI retired it. So does anyone know other data management systems like SRS? Is SRS still be free for academic use?
Thanks!