Hello everybody, I am trying to BLAST a nucleotide query against a nucleotide database via command line.
The problem is that, when I try
blastall -p blastn -d mydatabase -i myquery I get just:
BLASTN 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= myquery (52 letters)
Nothing else is displayed, even when trying to make positive control experiments. What is wrong?
Thanks in advance.