Hi everyone although this question posted earlier but due to not satisfactory result i am posting again as i want to do same kind of research:
"What are different ways (tools or online resources) to find SNPs between Whole Genomes of two Bacterial Strains?"
I have 50 ecoil whole genome sequence data. I already assembled all the sequence data and now i want to find SNP with a reference. Can anyone suggest some idea??
Thank you advance.