I have currently completed the blasting and annotation of a large data file consisting of de novo aligned Illumina sequencing reads. However the annotation file only gives me the gene name, the p-value, the contig number, and the NCBI Accession ID. The organism is a freshwater mussel, so not a commonly annotated organism.
My question is if there is a converter that can take those accession ID's and change them to GO ID's so I can create Gene Ontology figures to summarize the various biological processes these genes represent. I have tried various programs like DAVID and BIOMART but they seem to require that my gene accession list be of one specific type or I have to choose a model organism to convert with. I am getting errors left and right.
Am I missing something simple? Any help would be appreciated.