How To Download Venter Genome
1
2
Entering edit mode
10.2 years ago
Chen Sun ★ 1.1k

I want to download the Venter genome for comparing analysis with hg19.

I follow the link: http://huref.jcvi.org/ and find there are several resources:

  • Genome Sequence in Genbank
  • Traces from the NCBI Trace Archive
  • Read Data (fasta sequence, quality and xml meta data)
  • Additional Data (variants, microarray genotypes, and haplotypes)
  • Download HuRef databases
  • Celera Assembler

The first "Genome Sequence in Genbank" is most possible, but when I click it, it brings me to this link: http://www.ncbi.nlm.nih.gov/nuccore/148192284, where I do not know how to download the sequence.

I also try other links but did not find the sequences. The link "Download HuRef databases" just bring me to some sql files so I think it is not possible what I really want.

Can someone give me some suggestions?

JCVI genome • 3.9k views
ADD COMMENT
0
Entering edit mode
ADD REPLY
0
Entering edit mode

Thank you, is "Homo_sapiens" specific for Venter's genome? as first I thought "Homo_sapiens" means human's genome in general

ADD REPLY
0
Entering edit mode

the genome with name "HuRef" is venter's genome

ADD REPLY
2
Entering edit mode
10.2 years ago
Chen Sun ★ 1.1k

under ftp://ftp.ncbi.nih.gov/genomes/Homo_sapiens/, the sequence data with filename "HuRef" is venter's genome

ADD COMMENT

Login before adding your answer.

Traffic: 1993 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6