Question: Up To Date Allele Frequency Data - Larger Datasets?
3
gravatar for Devonj
5.2 years ago by
Devonj90
Berkeley, CA
Devonj90 wrote:

We are currently using 1000 genomes phase 1 and NHLBI Exome Sequencing Project data ( http://evs.gs.washington.edu/EVS/ ) data to determine variant allele frequency. Both of these are getting relatively old (in genomics terms)

I'm wondering if there are any larger datasets out there yet?

frequency allele • 1.6k views
ADD COMMENTlink modified 5.2 years ago by xb400 • written 5.2 years ago by Devonj90
1
gravatar for xb
5.2 years ago by
xb400
Chapel Hill, NC,USA
xb400 wrote:

How about these?

The larger or most recently updated one goes first !

ADD COMMENTlink modified 5.2 years ago • written 5.2 years ago by xb400

Thanks for the links but these are relatively unsatisfying. Was hoping for NGS based exome or whole genome data - perhaps I should have specified.

ADD REPLYlink written 5.2 years ago by Devonj90

Then you can easily compute such values directly from currently available NGS data, e.g. COSMIC, TCGA, etc.

ADD REPLYlink written 5.2 years ago by xb400
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