I calculated Fst values for a few genes in my genome pairwise between a couple of isolates.
It seems some of the genes have an order of magnitude higher Fst values then Fst values for other genes.
Fst shows population structure, and I read somewhere that genes with higher Fst values between sub populations may be involved in adaptability.
How does this compare with dN/dS > 1, which also should hint at genes involved in adaptability?
Which one would be more reliable?
Thank you, Adrian