Mirdeep2 Quantifier Module Output Files

Question

[liz9090950]

Hi everyone,

I am using the mirdeep2 quantifier module the quantify the miRNA expression with the default parameters.

As some miRNA can be mapped to multiple locations with different counts number, I am confused what the real counts means. Do the read counts mean expression quantity?

miRNA    read_count    precursor
hsa-let-7a-5p    1161351    hsa-let-7a-1

Answer 1

[Martombo]

see this Mirdeep2 Quantifier Module Output