Tool for pathogen Detection from metagenome

Question

[serene.s]

Hi Everyone!

I am analyzing whole metagenome samples and one of my goals is to find out if my samples have pathogenic microorganisms. So how do I go about it? I tried to search for tools which can detect the pathogens eg. PATRIC but unfortunately after uploading my file the job gets failed every time. Now I need some guidance on which tools I should look for only detecting the pathogens.

Also I am planning to find out the Antimicrobial resistance genes in my metagenomic samples so what tools or pipelines should I follow for that purpose.

Thanks
Saraswati