Identifying Cells co-expressing a list of genes
Entering edit mode
5 days ago
Bio ▴ 10

Hello, I have a 10X single cell rna seq data set that I analyzed using cell ranger. I want to determine whether any of the cells I sequenced are expressing all of a list of genes. For example, does any one cell express nano, oct4, tfap2c, and SOX17.

I believe that I can do thin in Seurat using the output from the cell ranger analysis. Does anyone know a tutorial or have advice on where to start?

Co-expression seurat 10X RNA-seq single-cell • 92 views

Login before adding your answer.

Traffic: 2772 users visited in the last hour
Help About
Access RSS

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6