mtDNA variant calling

Question

[here_for_learning]

Could someone suggest tools or the best way to get mtDNA HVS1 sequence in fasta format from the variants. As an example bellow a sample, I wanted from the identified variants to complete the HVS 1 sequence :-)

• sample / position / variants
• 001 / 16024 to 16365 / 16051G 16278T 16311C 73G 263G 315.1C 499A