Is there a way to include not conda package/programs to snakemake environment?
0
0
Entering edit mode
29 days ago

Hello. In my Snakemake workflow I am running in silico PCR with ipcress, and it is not conda package. I wonder is there a way to include information about this package in *.yaml file? And then somehow tell the rule where it is?

Non-Conda_packages Snakemake • 212 views
ADD COMMENT
2
Entering edit mode

Add an extra rule to download and setup the non-conda packages.

ADD REPLY
0
Entering edit mode

Thank you for the suggestion

ADD REPLY
0
Entering edit mode

My bad iPCRess comes with conda package exonerate

ADD REPLY

Login before adding your answer.

Traffic: 1191 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6