I have successfully installed HMMCopy and IchorCNA in R using the following commands:
**install_github("broadinstitute/ichorCNA")** **library(ichorCNA)** **if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("HMMcopy") library("HMMcopy")
While trying to run HMMCopy readcounter in R, I am not able to see its module readcounter.
readCounter** Error: object 'readCounter' not found
I need your help in this regard.