Entering edit mode
14 months ago
gamamiguelangel
•
0
Hello!
Anyone can help me please? Do you know a tool for map the mutations sites given a WT protein sequence and proteins variants?
For example:
wt.fasta (1 seq in fasta format):
wt_protein_example MAAAAAAAAAA ...
variants.fasta (in multifasta file format)
Variant_1 MAAAAAAAAAA ...
Variant_2 MATAAAAAAAA ...
Variant_3 MAAAPAAAARG ...
And for each protein sequence in variants.fasta file get a table (.CSV, etc) of mutations like:
Properly, i have 1 WT seq of TEM-1 b-lactamase and ~300,000 protein variants generated mi error prone PCR