Tool for list protein mutation sites from WT/variants sequences
0
0
Entering edit mode
5 months ago

Hello!

Anyone can help me please? Do you know a tool for map the mutations sites given a WT protein sequence and proteins variants?

For example:

wt.fasta (1 seq in fasta format):

wt_protein_example MAAAAAAAAAA ...

variants.fasta (in multifasta file format)

Variant_1 MAAAAAAAAAA ...

Variant_2 MATAAAAAAAA ...

Variant_3 MAAAPAAAARG ...

And for each protein sequence in variants.fasta file get a table (.CSV, etc) of mutations like: enter image description here

Properly, i have 1 WT seq of TEM-1 b-lactamase and ~300,000 protein variants generated mi error prone PCR

Tool Mutations AminoacidSites Protein • 192 views
ADD COMMENT

Login before adding your answer.

Traffic: 2602 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6