I want to learn microarray metadata analysis using R. The tutorials that I am following all are for an older version of R. Where can get an R script for microarray metadata analysis which will work for the R version >= 4.0?
Which tutorials are you following? please link to them.
meraDE, MetaQC, Metapath
I am not sure what is the issue. These should still work with R 4.0.x. In some cases, a package may be deprecated, in which case you just need to download the tar.gz of the final version [prior to deprecation] and then install this via install.packages()
yes I tried that but after running this-
shiny::runApp('metaOmics', port=9987, launch.browser=T)
getting error like this at the end-
Output created: C:/Users/AppData/Local/Temp/RtmpK0rbpa/file2a2878225074.html
> shiny::runApp('metaOmics', port=9987, launch.browser=T)
Listening on http://127.0.0.1:9987
Warning: Error in get: object '%AND%' not found
80: directoryInput [global/directoryInput.R#73]
73: setting_ui [ui/setting_ui.R#4]
It redirects to the browser which shows the error. Please find the attached screenshot.
I would post this an an issue on the GitHub page: https://github.com/metaOmics/metaOmics
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