Entering edit mode
3.0 years ago
MANYA_BIOINFO
•
0
helllo all, I am working with SCENIC and i wanted to visualize the Regulatory network based on TF and genes based on weight. I have attached part of the example data
GENE TF Weight
SCAF4 ADNP2 0.014681328
FXR1 AEBP2 0.015255361
POLDIP3 AEBP2 0.016756856
ZCCHC7 AEBP2 0.014026398
RBM5 AFF4 0.017212446
SECISBP2L AFF4 0.016822988
FMR1 AGGF1 0.012665615
RC3H1 AGGF1 0.014538355
EIF4A2 AKR1A1 0.012720702
FAM50A AKR1A1 0.020303092
TFB1M AKR1A1 0.017035138
AHNAK ANXA1 0.016743796
ANXA2 ANXA1 0.022482304
HMGN2 ANXA1 0.016877484
DDX49 ANXA11 0.014132594
I want to visualize something like this.
