Multiple Entity Id for same file in GDC
0
0
Entering edit mode
5 months ago
matcap97 • 0

Hello everyone, I'm trying to find out the correspondence between some files downloaded from GDC and the sample type. In some cases, there are more entity id and type of sample for the same file. I don't understand which one to consider as the actual type.

This is an example: https://portal.gdc.cancer.gov/files/00129da6-6243-4664-b739-19b20f636bef

In this file, there are two entity ids and one is primary tumour and the other one Blood Derived Normal, but the file is only one. Which is the correct sample id?

Thanks

GDC • 186 views
ADD COMMENT
1
Entering edit mode

Since you are talking about a file generated from a tumor-normal paired analysis. So it's expected you will find information about both tumor and normal aliquot in sample sheet.

ADD REPLY

Login before adding your answer.

Traffic: 2398 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6