Question

Looking for both RNA-Seq and Single Cell RNA-Seq data collected from the the same individuals

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2.9 years ago

ali_karimnezhad ▴ 20

Is there any way to download both RNA-Seq and Single Cell RNA-Seq (scRNA-seq) data collected from the same individuals (preferably in ExpressionSet format)? I am aware of this post but those pages refer to scRNA-seq data only.

scRNA-seq RNASeq • 1.2k views

ADD COMMENT • link 2.9 years ago by ali_karimnezhad ▴ 20

score 1 · Answer 1 · 2021-05-17

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2.9 years ago

Zhenyu Zhang ★ 1.2k

GDC has a few (in CPTAC-3 project)

ADD COMMENT • link 2.9 years ago by Zhenyu Zhang ★ 1.2k

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Many thanks.

ADD REPLY • link 2.9 years ago by ali_karimnezhad ▴ 20

score 1 · Answer 2 · 2021-05-17

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2.9 years ago

EagleEye 7.5k

Check out this recent publication, they used both bulk and scRNA-seq (I am not sure if it is from same individuals). If you read in details, you will able to find out. Hope this helps.

The coding and long noncoding single-cell atlas of the developing human fetal striatum http://doi.org/10.1126/science.abf5759