Chipseq allelic density plot for TSS region
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5 months ago
BISEP • 0

Hello I have allelic Chipseq data for this I wanted density plot, Is it need to do peak calling and find the TSS density plot if so how to do the peak calling for allelic bam files, or directly using bam to bigwig and from Deeptools computematrix file I can get the Density plot from plotprofile for each allele is it correct way of doing anyone suggest me

my main question is peak calling I have to do or not?

Thank you

Chip-Seq Allelic-Chipseq Deeptools • 143 views
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