Size factor between bcl and fastq
0
0
Entering edit mode
2.9 years ago
Michael ▴ 270

What is very roughly the size factor between bcl and the basecalled fastq files? Novaseq 6000.

bcl NGS Illumina Fastq • 2.1k views
ADD COMMENT
1
Entering edit mode

If you don't want to know any particular case (pe/se or flowcell type) the difference is around 600GB for an S4 flowcell run.

ADD REPLY
0
Entering edit mode

Thanks! What size factor is this roughly for the example you have in mind? (sizeFastQ / size BCL)

ADD REPLY
0
Entering edit mode

The total size of fastqs (gzip compressed) ~1.8 TB and BCL files ~1.2 TB.

ADD REPLY

Login before adding your answer.

Traffic: 2607 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6