Looking for a user-friendly comparative genomics program

Question

[kira kira]

Hi,

I'm currently using BRIG for visual comparison of genome sequences but I keep on having problems with it. Errors and such. Plus, there aren't that many comprehensive tutorials on the internet. Anybody got a program in mind? Leaning on to the beginner-friendly side. I'll be needing it for a comparative genomics research; comparing complete bacterial genome sequences.

Thanks, Kira.

Answer 1

[GenoMax]

Check out mauve (LINK).

[kira kira]

Thanks! Will give it a shot.