I’m trying to construct a graph with toil-vg but have issues with memory and the gcsa indexing.
I would like to know how the values are determined in the follow-up error : “Requesting more disk than either physically available, or enforced by --maxDisk. Requested: 139586437120, Available: 133757087744”.
Is it really simply just disk memory ? Because I know I have way more than what is requested, so if anyone could explain it to me please.
Here’s the configuration I use : gcsa-index-mem: '230G' gcsa-index-disk: '130G' gcsa-index-preemptable: False