How can I upload pan-genome database data to Neo4j?
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2.9 years ago

Using an pan-genome building tool (Pantools, accesible: https://github.com/Sheikhizadeh/pantools) I've ended with a database in an unfamiliar format to me wich in theory should be explorable by the Neo4j browser. Nevertheless I can't seem to find any way to achieve so and any mention on how to do it in any bibliography besides the instructions of the manual provided by the author of said tool.

I've tried to do this using Neo4j community edition server (v. 3.5.3) with the example file same as the instructions sugest but it just doesn't seem to detect the database showing only the default one.

The mentioned part of the tutorial can be found here: https://www.bioinformatics.nl/pangenomics/manual/tutorial_part3/

pantools pan-genome Neo4J • 440 views
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