Mapping gene list with chromosome location
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7 weeks ago

Hi there,

Is there any way to map a list of genes with chromosome "start" and "end" intervals? My list of the gene is like 70 and I believe there should be some way to do it computationally in R rather than manually.

Thank you!
Imran

R • 172 views
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What have you tried? This question has been addressed a few times on the forum.

Also, please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the code formatting option shown below), or use a GitHub Gist if the content volume exceeds allowed length here.

code_formatting

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imrankhanbioinfo - Code formatting an image link is ... bizarre. Read the post I linked to and copy-paste the text that you took a screenshot of.

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Ohh ok. I deleted the images. I will be trying GenomicRanges in R. I am not sure if it will solve my issue. Would u mind sharing the link where it was discussed before, please? Thank you!

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Search the forum with keywords, and you'll find posts. Example search: https://www.biostars.org/post/search/?query=gene+chr+location

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